BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009B03SP1|AL425978
(503 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig152 190 3e-48
>3x_Contig152
Length = 823
Score = 190 bits (95), Expect = 3e-48
Identities = 126/137 (91%)
Strand = Plus / Plus
Query: 366 taccagcattcttagaatgattaaatgaacaataattatataatttataattaataaatt 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taccagcattcttagaatgattaaatgaacaataattatataatttataattaataaatt 60
Query: 426 atatattttkbtbbscccccccttcaaaccctacaatattattaggggtttccccacggt 485
|||||| | | | |||| ||||||||||||||||||||||||||||||||||||
Sbjct: 61 atatataataatattctttccctgcaaaccctacaatattattaggggtttccccacggt 120
Query: 486 caccttcccgacccaca 502
|||||||||||||||||
Sbjct: 121 caccttcccgacccaca 137
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4782
Number of Sequences: 1807
Number of extensions: 4782
Number of successful extensions: 135
Number of sequences better than 1.0e-20: 1
length of query: 503
length of database: 10,358,551
effective HSP length: 15
effective length of query: 488
effective length of database: 10,331,446
effective search space: 5041745648
effective search space used: 5041745648
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)